dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02237
Location and strand information: 136447 - 137073 (+)
Family: 8.A.59.4.1
Protein type: TC
Protein description: Cyclic di-GMP phosphodiesterase

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02238
Location and strand information: 137155 - 138144 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02239
Location and strand information: 138158 - 139900 (-)
Family: 3.A.1.135.8
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02240
Location and strand information: 139907 - 141706 (-)
Family: 3.A.1.21.1
Protein type: TC
Protein description: Iron import ATP-binding/permease protein IrtA

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02241
Location and strand information: 141942 - 142724 (-)
Family: 2.A.5.5.2
Protein type: TC
Protein description: Zinc transporter ZupT

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02242
Location and strand information: 143216 - 143929 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02243
Location and strand information: 144336 - 145454 (+)
Family: 9.B.141.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02244
Location and strand information: 145458 - 146228 (+)
Family: 9.B.141.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02245
Location and strand information: 146513 - 146935 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02246
Location and strand information: 147039 - 147989 (-)
Family: CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.591
Protein molecular weight: 36473.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000014_8|CGC3
Gene ID: MGYG000000014_02247
Location and strand information: 148354 - 149697 (-)
Family: 1.A.26.1.1
Protein type: TC
Protein description: Magnesium transporter MgtE

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000014_02237	Cyclic di-GMP phosphodiesterase	TC	136447	137073	+	8.A.59.4.1
MGYG000000014_02238	HTH-type transcriptional activator RhaR	TF	137155	138144	-	HTH_AraC
MGYG000000014_02239	Lipid A export ATP-binding/permease protein MsbA	TC	138158	139900	-	3.A.1.135.8
MGYG000000014_02240	Iron import ATP-binding/permease protein IrtA	TC	139907	141706	-	3.A.1.21.1
MGYG000000014_02241	Zinc transporter ZupT	TC	141942	142724	-	2.A.5.5.2
MGYG000000014_02242	hypothetical protein	null	143216	143929	+	No domain
MGYG000000014_02243	hypothetical protein	TC	144336	145454	+	9.B.141.1.3
MGYG000000014_02244	hypothetical protein	TC	145458	146228	+	9.B.141.1.2
MGYG000000014_02245	hypothetical protein	null	146513	146935	+	DUF1284
MGYG000000014_02246	hypothetical protein	CAZyme	147039	147989	-	CE4
MGYG000000014_02247	Magnesium transporter MgtE	TC	148354	149697	-	1.A.26.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature